drivers of extinction – Page 13 – Center for Invasive Species Prevention

New Alarms About Phytophthora species in U.S. Nurseries

sticky monkey flower – plant on right is infested by P. tentaculata; photo by Suzanne Rooney-Latham, California Department of Food & Agriculture

In April, I posted a blog reporting on a study in Europe that documented 64 Phytophthora taxa detected in woody plant nurseries or forest restoration plantings. The presence of Phytophthora was widespread, if not universal: 91% of the 732 nurseries analyzed and 66% of forest and landscape plantings had at least one Phytophthora taxon present.

The risk of serious disease in native European plants appears to be substantial: one or more of 19 Phytophthora species which can attack native European or widely-planted trees and shubs were isolated from 84% of ornamental planted stands. Hundreds of previously unknown Phytophthora–host associations were observed.

These percentages could be underestimates, because detection of Phytophthora infestation is difficult. One of the principal difficiulties is that the majority of infested plants in nurseries did not display symptoms.

How does the situation in Europe compare to that that in the United States? We don’t know, because no-one has carried out a similarly wide-ranging, nation-wide study. However, some partial studies indicate reason for concern.

Knaus et al. 2015 summarized their own findings from Oregon and those of earlier state-by-state studies:

Knaus and colleagues surveyed symptomatic Rhododendron in seven nurseries in Oregon and found evidence of widespread infestation. P. syringae was found in all seven nurseries; P. plurivora in six. Nine other taxa were found in one or a few nurseries. Which Phytophthora species were present varied greatly across nurseries and – within individual nurseries – by season (spring or fall).
Surveys by Schwingle and colleagues of 45 nurseries in Minnesota in 2002-2003 and fewer nurseries in 2004 and 2005 found five Phytophthora species.
A survey by Warfield and colleagues of 14 North Carolina nurseries in 2003 found three Phytophthora species.
Donohue and Lamour surveyed 29 Tennessee nurseries in 2004-2005; they found seven Phytophthora species.
A survey of 1,619 California nurseries in 2005 and 2006 carried out by Yakabe and colleagues found eight Phytophthora species (but see below).
A survey of 10 Maryland nurseries by Bienapfl and Balci in 2010-2012 found 10 Phytophthora species; six of these were on plants that had arrived recently from West Coast suppliers.
A set of repeated surveys of four Oregon nurseries in 2006 – 2009 by Parke and colleagues found 16 Phytophthora species on rhododendron tissues (most of studies looked only at lesions on leaves)

All these studies found the P. citricola complex to be the most widespread. In West Coast nurseries, P. syringae was common.

Knaus et al. conclude that since there is a great amount of heterogeneity among Oregon nurseries, it is likely that, as more nurseries are surveyed, a greater amount of Phytophthora diversity may be discovered within nurseries.

Most of the surveys reported by Knaus and colleagues were done in response to detection of the sudden oak death pathogen (SOD), P. ramorum, on plants shipped from California and Oregon in the interstate plant trade. Since funding for tracking P. ramorum and other Phytophthora species in nursery stock has fallen considerably (see below), it is unlikely that such surveys will be repeated or expanded to other states – despite the apparent widespread presence of these actual or potential pathogens.

Crisis in Native Plant Nurseries in California – What Does it Mean for Other States?

California has discovered the widespread presence of Phytophthora in native plants used to restore native habitats after disturbance, e.g., construction of water or other projects. These pathogens were traced to native plant nurseries. Nursery stock had been planted before the infestation problem was realized – so restoration managers are now trying to clean up both the nurseries and the restoration sites. This situation was discussed during a special session of the 6^th SOD Science Symposium in San Francisco in June 2016. More than 170 people attended the session – demonstrating a high level of concern in the native plant community. Abstracts and presentations will be available at http://ucanr.edu/sites/sod6/.

The problem was first discovered in 2012 when a nursery noted severe dieback of sticky monkey flower (Diplacus (Mimulus) aurantiacus). The California Department of Food and Agriculture (CDFA) identified the cause as P. tentaculata – which is a federally-designated “quarantine pest”. It had never before been detected in the United States.

Native plant nursery owners and restoration ecologists responded quickly by sending many samples for identification. Between January 2014 and June 2016, CDFA evaluated 1,500 samples from nurseries and field sites. One quarter of the samples were positive for at least one Phytophthora species. In total, 25 species were detected, although 70% of the samples belonged to one of six taxa.

Little is known about root pathogens of California’s native plants. The sample results revealed a long list of newly detected associations. However, it has also proved especially difficult to detect symptoms on some plants. Finally, since only symptomatic plants were sampled, it is likely that additional plant-Phytophthora associations remain to be detected.

No one knows which plant-Phytophthora associations are capable of creating epidemics of plant disease. At least two species have raised particular concern:

P. tenticulata. This causes root and stem rot on a wide variety of plants, including several in the Asteraceae and Lamiaceae – two large, widespread, and horticulturally significant plant families. See http://www.suddenoakdeath.org/wp-content/uploads/2015/02/P.tentaculata.Pest_.Alert_.022315.pdf ); and
quercina. This pathogen is aggressive on all of Europe’s oak trees. It is also a federal quarantine pest.

Among the “lessons learned” are two previously identified following the detection of P. ramorum in horticultural nurseries a decade earlier and reinforced now:

artificial irrigation of plants in nurseries facilitates infestations and movement of infested plant material; and
re-use of infested pots facilitates spread of these infestations.

Therefore, both nursery managers and regulators need to be alert to this risk in all types of nurseries. The necessary changes in nursery practices will take time. See the talk by Alisa Shor from the Parks Conservancy, which operates the nursery for the Golden Gate National Recreation Area when the meeting presentations are posted at http://ucanr.edu/sites/sod6/. Shor described the extensive efforts made by Parks Conservancy nurseries to clean up and adopt new procedures.

Agencies responsible for restoration projects face a daunting task. They have found dozens of Phytophthora taxa at already-planted sites, including the two identified above as federal quarantine species. Managers must develop best management practices that apply to contract specifications for equipment and workers operating on those sites; for nurseries wishing to bid to supply plants; and for planting protocols. Meanwhile, existing restoration regulations require them to restore plant cover quickly – which cannot be done by relying on seed – which is less likely to harbor a pathogen than the containerized plants now used.

As noted above, the high-risk nursery practices identified in this case match those identified over the past decade in response to the spread of sudden oak death (SOD) through nursery stock. Ted Sweicki, an ecologist long engaged on SOD and related issues and now advising the restoration agencies, noted that it is easier to prevent introduction of a Phytophthora to a site then to clean up the site afterwards. He advocated adoption of systems approach to mitigate Phytophthora presence in nurseries. Ted said this is not a new idea! However, adoption of such practices has been far too slow in the horticultural trade. Ted was hopeful that this new crisis in California would have a different result because:

Owners of native plant nurseries are strongly concerned about the environment;
Restoration agencies are averse to being responsible for introduction of Phytophthora species to their lands; and
These agencies make purchases that are sufficiently large to empower the agencies to compel nurseries to comply with strict protocols.

People in other states should not rest easy. There is no reason to think this problem is limited to California. Other states need to be looking at the diversity of Phytophthora species in their nurseries and plantings. But are they doing so?

Meanwhile, federal funds that have supported studies of the genetics of P. ramorum in both West Coast forests and in nurseries are rapidly disappearing. The information provided by these studies has been crucial to tracing movement of various strains of the pathogen.

As noted in my earlier blog, none of the 59 Phytophthora taxa thought to be alien in Europe had been intercepted at European ports of entry. In the U.S., it has not been determined how the P. tentaculata detected in 2012 was introduced. Authorities suspect it was introduced on plant imports.

These situations reinforce the importance of APHIS promptly finalizing its 2013 proposed revision to regulations governing imported plants [http://federalregister.gov/a/2013-09737]. The proposed rule would establish APHIS’ authority to require foreign plant suppliers to adopt “critical control point”-type systems approaches to improve the cleanliness of plants intended for export to the United States. Such an approach is authorized by both a North American regional standard (RSPM#24; go here) and an international standard (ISPM#36; go here) for plant protection.

You can give APHIS a push by writing your member of Congress and Senators. Ask them to urge the Secretary of Agriculture to finalize this proposal.

As regards plants being shipped within the country, the U.S. nursery trade is working with federal and state regulators to develop and encourage adoption of similar, but voluntary, integrated systems approaches to minimize pest presence on plants being sold interstate. This proposed approach is being tested by eight nurseries across the country. However, full adoption is still years away. To learn more about the “SANC” program (“A Systems Approach to Nursery Certification”), go here.

SOURCES

Jung, T. et al. 2015 “Widespread Phytophthora infestations in European nurseries put forest, semi-natural and horticultural ecosystems at high risk of Phytophthora disease” Forest Pathology. November 2015; available from Resource Gate

Knaus, B.J., V.J. Fieland, N.J. Grunwald. 2015. Diversity of Foliar Phytophthora Species on Rhododendron in Oregon Nurseries. Plant Disease Vol 99, No. 10 326 – 1332

Posted by Faith Campbell

When will invasive species get the respect they deserve from conservationists?

i`iwi in Hawai`i

photo from www.TheBirdBlogger.com; used with permission

Evidence is growing that invasive species are among THE major threats to conservation goals worldwide.

In 2015 the IUCN called invasive species the second most significant threat to those World Heritage sites around the world that have outstanding natural values. (Poaching is the greatest threat.) My October 21, 2015 blog showed that the IUCN report actually underestimated the impact of invasive species. I listed briefly the principal invaders in several U.S. National parks. Earlier blogs criticized the National Park Service for failing to regulate the movement of firewood (August 2015) and described the invasive threat to Hawai`i (earlier in October 2015).

Now a second study shows invasive species are a principal driver of species extinction. The authors assessed the prevalence of alien species as a driver of extinctions among plants, amphibians, reptiles, birds, and mammals (which are the best-studied taxa) post-1500 AD. Overall, 58% of extinct or extinct-in-the-wild species had been driven to extinction at least in part by invasive species. Invasive alien species are the second most common threat overall. Indeed, invasive species are the most common threat for vertebrate extinctions (62% of extinct or extinct-in-the-wild species faced threats from invasive species). Invasive species ranked fourth as a cause of extinction for plants: 27% of listed plant species were threatened by invasive species.

For those species with just a single driver of extinction, invasive species is the cause for 47% of mammals, 27% of birds, 25% of reptiles, and 17% of plants. In no case were invasive species identified as the sole threat to an amphibian species – although invasive species are their second highest threat.

Although the paper lists invasive species as second, their threat was virtually identical to that of “overexploitation”, the threat ranked first. That is, 124 out of 215 species studied were threatened at least in part by invasive species; 125 were threatened by overexploitation.

Other principal threats were overexploitation, agriculture, aquaculture, and – in the case of plants – residential and commercial development. Categories related to habitat loss ranked surprisingly low. Only 61 of the 215 cases listed agriculture and aquaculture as threats.

The authors reflect on whether invasive species are not themselves causal agents of extinction, but rather symptoms of the real causes, especially habitat destruction. They conclude that that is unlikely.

Instead, they suggest that invasive species impacts might often be underestimated, as many interactions – especially those between alien parasites and native hosts – are very hard to detect.

Not surprisingly, 86% of island endemic species had invasive species as one extinction driver. Nevertheless, continental organisms are also threatened — 14% of alien-related extinctions have been of species with mainland populations. These include eight amphibians, five birds, and six mammals. Most of these invader-threatened mainland organisms are from the Americas

Among the approximately 30 alien taxa named as extinction drivers are rats, cats, and trout as threats to other vertebrates such as birds and mammals. All three were also ranked highly as damaging invasives in the earlier IUCN report on World Heritage sites. Diseases – especially chytridiomycosis and avian malaria – were causal agents of extinction for amphibians and birds. Several herbivores – especially goats, sheep, and European rabbits – and alien plants were drivers of extinction for plant species.

Of course, outright extinction is not the only damage to biological diversity caused by invasive species. American chestnut, Fraser fir, and redbay are not extinct, but their ecological role has been virtually eliminated as the vast majority of these forest trees die off. Other tree taxa are on same road – ash and eastern hemlocks across wide expanses of their ranges; tanoaks; whitebark pines …

Invasive species pose major threats to biological diversity and other conservation goals. These damages are on top of the acknowledged threat of invasive species to agriculture, forestry, or economic groups. (See, for example, Lovett et al. 2016 discussed in my previous blog.) The role of invasive species in extinction described in this new paper suggest a long-standing bias among conservationists’ priorities. Too often, we have focused on species threatened by overexploitation – which is such easier to see and involves an obvious “villain”.

Nevertheless, a host of practical suggestions have been put forward to address the root causes of species introductions and spread. Often, these ask some or many of us to stop doing what we have been doing. But much meaningful conservation action requires someone to accept limits or to make sacrifices.

Will the conservation community – including grant-making foundations, federal and state agencies, and the many conservation non-governmental organizations ranging from the IUCN to local groups – now take up the challenge of implementing suggested actions and actively advocating for the funding needed for practical steps that will begin to bring this threat under control?

Sources

Bellard C, Cassey P, Blackburn TM. 2016 Alien species as a driver of recent extinctions. Biol. Lett. 12: 20150623. http://dx.doi.org/10.1098/rsbl.2015.0623 http://rsbl.royalsocietypublishing.org /

Lovett,G.M., M. Weiss, A.M. Liebhold, T.P. Holmes, B. Leung, K.F. Lambert, D.A. Orwig , F.T. Campbell , J. Rosenthal, D.G. McCullough, R. Wildova, M.P. Ayres, C.D. Canham, D.R. Foster, S.L. LaDeau, and T. Weldy. 2016. Nonnative forest insects and pathogens in the United States: Impacts and policy options. Ecological Applications, 0(0), 2016, pp. 1–19. DOI 10.1890/15-1176.1

Available at www.caryinstitute.org/tree-smart-trade

Posted by Faith Campbell

Cacti under Threat – Does No One Care?

Nearly 2 million square miles of ecologically significant and beautiful desert ecosystems straddle the U.S.-Mexico border regions. Cacti are either dominate or are extremely important components of these ecosystems. Two South American insects already present in the United States threaten to kill large numbers of these cacti and transform these desert ecosystems. Iconic species – prickly pears, saguaro, and organ pipe cacti – are at risk.

prickly pear cactus at Factory Butte; photo by S.E. Schlarbaum

Flat-padded prickly pear cacti of the genus Opuntia are threatened by the cactus moth, Cactoblastis cactorum.
In 1989, the cactus moth was found in southern Florida, to which it had spread from the Caribbean islands (Simonson 2005). Since then, it has spread west as far as southern Louisiana. Two small outbreaks on islands off Mexico’s Caribbean coast have been eradicated. If it reaches the arid regions of Texas, it is likely to spread throughout the desert Southwest.
In Florida, the cactus moth has caused considerable harm to six native species of prickly pear, three of which are listed by the state as threatened or endangered. In the American Southwest, at least 80 species of flat-padded prickly pears are at risk (Simonson et al. 2005) and there are more in Mexico, which is the center of endemism for Opuntia.
These cacti support a diversity of pollinators as well as deer, javalina (peccaries), tortoises, and lizards. Prickly pears also shelter packrats –which in turn are fed on by raptors, coyotes, and snakes; nesting birds and plant seedlings. Their roots hold highly erodible soils in place (Simonson 2005).
The U.S. Department of Agriculture began trying to slow the spread of the cactus moth in 2005 – 15 years after it was first detected in Florida (Mengoni Goñalons et al. 2014). However, the program never received an appropriation from Congress so funding was always inadequate. For several years, a patchwork of projects was stitched together: Mexico provided some funding; a volunteer network managed by Mississippi State University monitored lands along the Gulf Coast for the moth; and a laboratory operated by the Florida Department of Agriculture reared moths for research, sterile male releases and biocontrol host specificity testing.
The continuous funding problems led APHIS to abandon its regional program and focus on biocontrol, which is the only viable control measure in the desert Southwest where vulnerable cacti are numerous and grow close together. A newly described wasp, Apanteles opuntiarum (Mengoni Goñalons et al. 2014), is the most promising candidate.
Harrisia cactus mealybug might attack columnar cacti
The 2 million square miles of desert in Southwest United States and Mexico are home to more than 500 columnar cactus species in the Cactoideae (Zimmerman et al. 2010). Some are already endangered; others are totems of the desert, e.g., saguaro, organ pipe, and barrel cacti. The larger ones, particularly, play important ecological roles.
A second South American insect threatens columnar cacti in the Caribbean basin now and in the future could put others at risk in the American Southwest and Mexico: the Harrisia cactus mealybug (Zimmerman et al. 2010).
A mealybug in the genus Hypogeococcus has been killing several of the 13 columnar cactus species in southern Puerto Rico since 2005. Two are endangered species: Harrisia portoricensis and Leptocereus grantianus (USDA ARS). These cacti provide food or shelter for endemic bats, birds, moths and other pollinators (Segarra & Ramirez; USDA ARS). This mealybug is also now killing native cacti on the U.S. Virgin Islands (H. Diaz-Soltero pers. comm. August 2015).
Mealybugs in the same genus in Florida and Hawai`i do not attack cacti (University of Florida fact sheet; Hawai`i Department of Agriculture new pest report). In South America, though, insects in this genus feed on many columnar cacti, including ones in the genera Cereus, Echinopsis, Harrisia, Cleistocactus, Monvilea, and Parodia (USDA ARS; Zimmerman et al. 2010). Scientists are uncertain how many mealybug species are involved, which complicates efforts to determine the level of threat to columnar cacti on the U.S. mainland (H. Diaz-Soltero pers. com. August 2015). No one knows how vulnerable individual cactus species growing in the Southwest are to Hypogeococcus mealybugs (Golubov pers. comm. January 2011). Nor does anyone know whether natural enemies of mealybugs native to Mexico might also attack alien mealybugs and so prevent significant damage to native cacti (Zimmerman et al. 2010).
Still, the possible threat warrants studies to determine the vulnerability of these cacti to non-native mealybugs in the Hypogeococcus genus.
Meanwhile, scientists at the USDA ARS laboratory in Argentina have been searching for possible biocontrol agents but are stymied by the confusion over which mealybugs attach which cacti. Use of DNA sequencing and other tools should clarify these issues (H. Diaz-Soltero pers. comm. August 2015). However, no funds have been appropriated for this work, which has hindered progress (H. Diaz-Soltero pers. comm. August 2015).
To date, no organized constituency has advocated for protection of our cacti from these two pests. In the past I tried to persuade native plant societies, Nature Conservancy chapters, the leadership of the American Cactus and Succulent Society, and other groups that champion the desert to help lobby the Congress to fund USDA’s efforts. I was never successful.
Are Americans truly indifferent to the threat that many cacti in our deserts will be killed by non-native insects? Do they not realize that these threats must be countered before they reach the areas where cacti are dense and numerous?

Sources
California Plant Pest and Disease Report. 2005. Vol. 22 No. 1. Covering Period from July 2002 through July 2005.
Hawaii Department of Agriculture. 2006. http://hawaii.gov/hdoa/pi/ppc/2006-annual-report/new-pest-detections (accessed 11/1/10)
Mengoni Goñalons, C., L. Varone, G. Logarzo, M. Guala, M. Rodriguero, S.D. Hight, and J.E. Carpenter. 2014. Geographical range & lab studies on Apanteles opuntiarum (hymenoptera: braconiDae) in AR, a candidate for BC of Cactoblastis cactorum (Lepidoptera: Pyralidae) in North America. Florida Entomologist 97(4) December 2014
Segarra-Carmona, A.E., A. Ramirez-Lluch. No date. Hypogeococcus pungens (Hemiptera: Pseudococcidae): A new threat to biodiversity in fragile dry tropical forests. {title/org/other identifying information for Segarra-Carmona plus an entry for the pers. comm.}
Simonson, S.E., T. J. Stohlgren, L. Tyler, W. Gregg, R. Muir, and L. Garrett. 2005. Preliminary assessment of the potential impacts and risks of the invasive cactus moth, Cactoblastis cactorum Berg, in the U.S. and Mexico. Final Report to the International Atomic Energy Agency, April 25, 2005 © IAEA 2005
USDA Agriculture Research Service, Research Project: Biological Control of the Harrisia Cactus Mealybug, Hypogeococcus pungens (Hemiptera:pseudococcidae) in Puerto Rico Project Number: 0211-22000-006-10 Project Type: Reimbursable
Zimmermann, H.G., M.P.S. Cuen, M.C. Mandujano, and J. Golubov. 2010. The South American mealybug that threatens North American cacti. Cactus and Succulent Journal. 2010 Volume 82 Number 3

Posted by Faith Campbell